Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34126 1-Nitrohydroxyphenyl-N-benzoylalanine 330.0842 331.0929 121
P34165 Manilamine 282.1752 283.1828 121
P35261 valeryl 4-hydroxy valsartan 535.2720 536.2794 121
P36685 S-Formylmycothiol 514.1437 515.1516 121
P37725 PE(20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)/22:5(4Z,7Z,10Z,13Z,16Z)) 859.4946 860.4952 121
P40969 adipamide 144.0918 145.1001 121
P43405 Scutebarbatine H 469.2041 470.2102 121
P46239 Dymacrin D 438.3476 439.3533 121
P47087 N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine 268.1979 269.2062 121
P50181 Avermectin B1b monosaccharide 714.4022 715.4140 121

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G121800 hypothetical protein NA 3,117
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 3,095
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 3,091
Glyma.13G135300 hypothetical protein NA 3,024
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 3,024
Glyma.16G117400 hypothetical protein NA 3,001
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 2,989
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 2,919
Glyma.16G119400 hypothetical protein NA 2,832
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 2,739