Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P01325 7-Methoxymurrayacine 307.1223 308.1298 149
P07302 Melampyroside 450.1506 451.1589 149
P09071 888.1557 889.1645 149
P10311 2'-Cinnamoylsalicortin 554.1802 555.1831 149
P10689 1-(Pentafluorophenyl)propane 210.0480 211.0541 149
P14001 Quetiapine Sulfoxide 399.1540 400.1606 149
P16545 Sulfisomidine 278.0841 279.0918 149
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 356.1217 149
P17252 Riddelliine N-oxide 365.1502 366.1570 149
P25789 10-Isovaleryl kanokoside C 722.3032 723.3071 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139100 hypothetical protein NA 451
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 449
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 448
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 447
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 447
Glyma.09G250000 hypothetical protein NA 443
Glyma.16G209000 hypothetical protein NA 440
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 438
Glyma.11G024800 hypothetical protein NA 437
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 436