Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55138 2-(4-Methyl-5-thiazolyl)ethyl octanoate 269.1475 270.1553 —
P55139 457.1180 458.1261 —
P55143 Methoxyisobutylisonitrile 113.0832 114.0907 —
P55147 563.5411 564.5502 —
P55149 Androsta-4,16-dien-3-one 270.1954 271.2018 —
P55150 Chatferin 336.2300 337.2352 —
P55155 5-Ethyl-3-methyl-2E,4E,6E-nonatriene 164.1552 165.1623 —
P55156 Platyphylline 337.1879 338.1945 —
P55157 9-Chloro-17beta-hydroxy-17-methylandrost-4-ene-3,11-dione 350.1686 351.1759 —
P55159 Liangshanin C 372.1911 373.1958 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139100 hypothetical protein NA 451
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 449
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 448
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 447
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 447
Glyma.09G250000 hypothetical protein NA 443
Glyma.16G209000 hypothetical protein NA 440
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 438
Glyma.11G024800 hypothetical protein NA 437
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 436