Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07022 Melrosin A 476.1705 477.1753 106
P10935 Acorafloxacin 419.1693 420.1730 106
P11923 Tyr-Val-Ala-Asp-chloromethyl ketone 498.1859 499.1895 106
P13185 N-Acetyl-serylaspartic acid 262.0810 263.0892 106
P16218 905.4256 906.4362 106
P16647 Loquatoside 438.1138 439.1203 106
P16934 405.5674 406.5711 106
P17618 Isopropyl phenylacetate 178.0981 179.1063 106
P17737 4'-Hydroxy-4-(4-hydroxystyryl)-7-methoxyflavan 374.1455 375.1552 106
P18372 N-Acetylphenylalanine beta-naphthyl ester 333.1364 334.1448 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139100 hypothetical protein NA 451
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 449
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 448
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 447
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 447
Glyma.09G250000 hypothetical protein NA 443
Glyma.16G209000 hypothetical protein NA 440
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 438
Glyma.11G024800 hypothetical protein NA 437
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 436