Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48148 N-(15Z-tetracosenoyl) taurine 473.3565 474.3625 110
P49298 Glycyltyrosine 238.0921 239.0980 110
P52035 cis-Communal 286.2267 287.2342 110
P54535 (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile 202.1223 203.1291 110
P00974 Sertraline 305.0751 306.0843 109
P04848 Nitrobenzene 123.0319 124.0390 109
P06573 7-Hydroxyfluphenazine 453.1741 454.1800 109
P08590 Aspartyl-Aspartate 248.0653 249.0725 109
P09565 Fendosal 381.1405 382.1481 109
P10671 Endothal-disodium 186.0520 187.0588 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139100 hypothetical protein NA 451
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 449
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 448
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 447
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 447
Glyma.09G250000 hypothetical protein NA 443
Glyma.16G209000 hypothetical protein NA 440
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 438
Glyma.11G024800 hypothetical protein NA 437
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 436