Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55327 8,8''-Biskoenigine 616.2599 617.2636 —
P55329 607.7540 608.7639 —
P55341 Tetraphenylporphyrin 614.2471 615.2555 —
P55343 624.9928 625.9968 —
P55350 609.0479 610.0613 —
P55357 339.0868 340.0942 —
P55361 Aerobactin 564.2333 565.2435 —
P55362 L-gamma-Glutamyl-beta-phenyl-beta-L-alanine 294.1177 295.1250 —
P55363 331.5836 332.5907 —
P55366 Dexrazoxane 268.1177 269.1254 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 464
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 463
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 463
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 461
Glyma.04G063900 hypothetical protein NA 459
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 458
Glyma.16G117700 hypothetical protein NA 456
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 454
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 454
Glyma.16G161500 hypothetical protein NA 452