Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07539 Quercetin 3-(6''-ethylglucuronide) 506.1114 507.1169 134
P07584 Xanthopappin A 172.0347 173.0429 134
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 538.1922 134
P20347 Girolline 190.0621 191.0692 134
P20702 2-(Methylenebutyl)-cyclopropane 110.1086 111.1160 134
P23823 Tubastrindole G 509.2142 510.2207 134
P26981 Leandreanin B 774.2748 775.2841 134
P30845 methyl 9S,11R,15S,18-tetraacetoxy-5Z,13E-prostadienoate 552.2877 553.2929 134
P32272 8-Azaguanine 152.0460 153.0536 134
P33627 Vomifoliol 9-[glucosyl-(1->4)-xylosyl-(1->6)-glucoside] 680.2888 681.2956 134

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase family 487
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 480
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 479
Glyma.10G028500 hypothetical protein NA 477
Glyma.05G137500 hypothetical protein NA 476
Glyma.05G137600 hypothetical protein NA 476
Glyma.01G034700 hypothetical protein NA 473
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 473
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 472
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 467