Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45201 Reduced ketanserin 397.1809 398.1901 151
P46667 1558.8251 780.4180 151
P50770 195.5809 196.5888 151
P55369 Amprenavir 505.2250 506.2316 151
P04083 2-[(4-Phenoxyphenyl)sulfonylmethyl]thiirane 306.0384 307.0460 150
P04213 5,6-Dihydroxy-7,8,4'-trimethoxyflavanone 346.1039 347.1114 150
P06527 242.0408 243.0484 150
P06756 Sertraline 305.0731 306.0811 150
P08828 Thorectandramine 437.1702 438.1784 150
P09793 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1184 427.1241 150

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase family 487
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 480
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 479
Glyma.10G028500 hypothetical protein NA 477
Glyma.05G137500 hypothetical protein NA 476
Glyma.05G137600 hypothetical protein NA 476
Glyma.01G034700 hypothetical protein NA 473
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 473
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 472
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 467