Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55067 6-Galloylglucose 310.1444 311.1521 —
P55071 Met-leu-phe 409.2063 410.2147 —
P55072 2-(1,3-Dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide 355.1626 356.1697 —
P55078 WF 14865B 367.1860 368.1898 —
P55080 alpha-Carboxyethyl hydroxychroman 222.0903 223.0962 —
P55088 Methylenecyclohexane 96.0927 97.1002 —
P55095 Nicergoline 483.1218 484.1274 —
P55098 3beta-Chloro-5-androsten-17beta-ol 308.1916 309.1988 —
P55107 Rosmarinine-2-acetate 395.1936 396.2015 —
P55125 2,4-Dimethyl-1-(1-methylethyl)-benzene 148.1239 149.1311 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase family 487
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 480
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 479
Glyma.10G028500 hypothetical protein NA 477
Glyma.05G137500 hypothetical protein NA 476
Glyma.05G137600 hypothetical protein NA 476
Glyma.01G034700 hypothetical protein NA 473
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 473
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 472
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 467