Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35928 Aloesone 7-O-glucoside 394.1231 395.1310 119
P36374 561.7929 562.7980 119
P37083 Sialyl-Le(a) oligosaccharide 1102.3780 1103.3803 119
P39162 FR 235222 556.3236 557.3294 119
P39954 852.2852 853.2931 119
P42881 Leupeptin 426.2931 427.3011 119
P43367 803.8936 804.9006 119
P43949 Serratezomine A 279.1813 280.1891 119
P44457 Montanastatin 740.4230 741.4366 119
P46832 dodecyl 2-methylpropanoate 256.2380 257.2448 119

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase family 487
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 480
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 479
Glyma.10G028500 hypothetical protein NA 477
Glyma.05G137500 hypothetical protein NA 476
Glyma.05G137600 hypothetical protein NA 476
Glyma.01G034700 hypothetical protein NA 473
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 473
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 472
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 467