Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32742 4,4'-Diapo-psi,psi-Carotenedioic acid mono-beta-D-glucopyranosyl ester 622.3172 623.3275 107
P33926 Cyclolinopeptide K 1089.5803 1090.5866 107
P36950 Istamycin AO 337.1843 338.1930 107
P37125 912.3493 913.3510 107
P37429 Dihydrotetrodecamycin 336.1566 337.1626 107
P39006 Dermorphin 802.3633 803.3714 107
P39715 Soyasaponin aa 1054.5351 1055.5439 107
P41862 m-Trigallic acid 474.0438 475.0510 107
P42153 Candidin 921.4826 922.4875 107
P42536 N-Methoxyspirobrassinol 282.0505 565.1102 107

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 521
Glyma.07G075300 hypothetical protein NA 521
Glyma.16G113000 hypothetical protein NA 521
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 520
Glyma.07G018100 hypothetical protein NA 515
Glyma.08G122600 hypothetical protein NA 513
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 512
Glyma.16G003200 hypothetical protein NA 512
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 510
Glyma.06G079400 hypothetical protein NA 508