Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24035 944.3487 945.3559 115
P31486 Mangostenone B 462.2048 463.2128 115
P33548 4,6,7-Trihydroxy-1,2,3,4-tetrahydroisoquinoline 181.0730 182.0796 115
P34212 N-succinyl-chitosan 583.2266 584.2365 115
P35073 105.0291 106.0364 115
P38388 2,2'-Azobis(2-amidinopropane) 198.1599 199.1664 115
P39278 Maoecrystal T 490.2499 491.2605 115
P39415 2,2-Dimethyl-N-(2,4,6-trimethoxyphenyl)dodecanamide 393.2865 394.2914 115
P40332 366.7200 367.7293 115
P41801 Fomidacillin 592.1682 593.1721 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 521
Glyma.07G075300 hypothetical protein NA 521
Glyma.16G113000 hypothetical protein NA 521
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 520
Glyma.07G018100 hypothetical protein NA 515
Glyma.08G122600 hypothetical protein NA 513
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 512
Glyma.16G003200 hypothetical protein NA 512
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 510
Glyma.06G079400 hypothetical protein NA 508