Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G118500 hypothetical protein NA 545
Glyma.06G118800 hypothetical protein NA 545
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 545
Glyma.09G275500 hypothetical protein NA 544
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 544
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 537
Glyma.03G124500 hypothetical protein NA 532
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 528
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 527
Glyma.16G140600 hypothetical protein NA 526