Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32742 4,4'-Diapo-psi,psi-Carotenedioic acid mono-beta-D-glucopyranosyl ester 622.3172 623.3275 107
P33926 Cyclolinopeptide K 1089.5803 1090.5866 107
P36950 Istamycin AO 337.1843 338.1930 107
P37125 912.3493 913.3510 107
P37429 Dihydrotetrodecamycin 336.1566 337.1626 107
P39006 Dermorphin 802.3633 803.3714 107
P39715 Soyasaponin aa 1054.5351 1055.5439 107
P41862 m-Trigallic acid 474.0438 475.0510 107
P42153 Candidin 921.4826 922.4875 107
P42536 N-Methoxyspirobrassinol 282.0505 565.1102 107

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G118500 hypothetical protein NA 545
Glyma.06G118800 hypothetical protein NA 545
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 545
Glyma.09G275500 hypothetical protein NA 544
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 544
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 537
Glyma.03G124500 hypothetical protein NA 532
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 528
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 527
Glyma.16G140600 hypothetical protein NA 526