Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11869 Sterequinone D 304.1081 305.1127 117
P12646 Asparenomycin A 340.0761 341.0851 117
P15474 Methyl syramuraldehydate 242.0775 243.0847 117
P17333 1-(1-methylethenyl)-3-(1-methylethyl)-benzene 160.1239 161.1307 117
P17337 Glucoerysodine 461.2040 462.2094 117
P19729 4-Ethyl-2,5-dimethyloxazole 125.0846 126.0911 117
P19799 Galangin 5-methyl ether 284.0690 285.0768 117
P23548 (4E)-Undec-4-enoyl-CoA 933.2692 934.2742 117
P25862 Amocarzine 371.1445 372.1498 117
P28613 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2758 965.2795 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G118500 hypothetical protein NA 545
Glyma.06G118800 hypothetical protein NA 545
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 545
Glyma.09G275500 hypothetical protein NA 544
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 544
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 537
Glyma.03G124500 hypothetical protein NA 532
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 528
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 527
Glyma.16G140600 hypothetical protein NA 526