Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00788 Tyrphostin B42 294.0991 295.1079 199
P07827 809.2516 810.2565 199
P14487 Yuzurimine E 429.2528 430.2610 199
P42503 121.9563 122.9631 199
P50354 Nodulisporic acid C2 701.4348 702.4409 199
P54402 Catuabine E 371.1815 372.1888 199
P26744 FR901537 507.1481 508.1541 198
P04642 Aminoacylase 536.2172 537.2249 197
P15145 Geodiamolide M 609.2125 610.2230 197
P33997 615.3757 616.3848 197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 560
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 559
Glyma.07G095400 hypothetical protein NA 559
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein 558
Glyma.05G233100 hypothetical protein NA 558
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 558
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 558
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 558
Glyma.09G018700 hypothetical protein NA 556
Glyma.09G062900 hypothetical protein NA 548