Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34126 1-Nitrohydroxyphenyl-N-benzoylalanine 330.0842 331.0929 121
P34165 Manilamine 282.1752 283.1828 121
P35261 valeryl 4-hydroxy valsartan 535.2720 536.2794 121
P36685 S-Formylmycothiol 514.1437 515.1516 121
P37725 PE(20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)/22:5(4Z,7Z,10Z,13Z,16Z)) 859.4946 860.4952 121
P40969 adipamide 144.0918 145.1001 121
P43405 Scutebarbatine H 469.2041 470.2102 121
P46239 Dymacrin D 438.3476 439.3533 121
P47087 N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine 268.1979 269.2062 121
P50181 Avermectin B1b monosaccharide 714.4022 715.4140 121

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 560
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 559
Glyma.07G095400 hypothetical protein NA 559
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein 558
Glyma.05G233100 hypothetical protein NA 558
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 558
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 558
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 558
Glyma.09G018700 hypothetical protein NA 556
Glyma.09G062900 hypothetical protein NA 548