Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11240 6-Benzylaminopurine 225.1038 226.1090 123
P15609 2-Isopropylfuran 110.0718 111.0795 123
P15845 Nigrospoxydon C 294.0747 295.0816 123
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 315.1765 123
P17713 939.2673 940.2706 123
P20071 Melochinone 331.1571 332.1663 123
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 538.3528 123
P30440 2-Isopropylfuran 110.0717 111.0792 123
P32052 Zanamivir 332.1327 333.1402 123
P33021 7-O-Methyl-N-deacetylipecoside 535.2335 536.2382 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 560
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 559
Glyma.07G095400 hypothetical protein NA 559
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein 558
Glyma.05G233100 hypothetical protein NA 558
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 558
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 558
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 558
Glyma.09G018700 hypothetical protein NA 556
Glyma.09G062900 hypothetical protein NA 548