Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43253 trans-3-Feruloylcorosolic acid 648.3975 649.4013 167
P45751 N-Acetyl-6-O-L-fucosyl-D-glucosamine 367.1494 368.1559 167
P50045 238.1769 239.1867 167
P50584 Caudoxirene 162.1039 163.1101 167
P04849 Gentisic acid 154.0271 155.0333 166
P11735 Okaramine M 482.2333 483.2390 166
P17290 4,4-Difluoro-17beta-hydroxyandrost-5-en-3-one propionate 380.2170 381.2234 166
P21583 771.2251 772.2359 166
P23922 N-[(2Z)-2-Methoxyiminopropyl]-7H-purin-6-amine 220.1076 221.1144 166
P29865 1069.5175 1070.5247 166

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G100200 hypothetical protein NA 577
Glyma.09G268900 hypothetical protein NA 575
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 572
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 566
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 565
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 565
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 563
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) 561
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 561
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 560