Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P34126 1-Nitrohydroxyphenyl-N-benzoylalanine 330.0842 331.0929 121
P34165 Manilamine 282.1752 283.1828 121
P35261 valeryl 4-hydroxy valsartan 535.2720 536.2794 121
P36685 S-Formylmycothiol 514.1437 515.1516 121
P37725 PE(20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)/22:5(4Z,7Z,10Z,13Z,16Z)) 859.4946 860.4952 121
P40969 adipamide 144.0918 145.1001 121
P43405 Scutebarbatine H 469.2041 470.2102 121
P46239 Dymacrin D 438.3476 439.3533 121
P47087 N-(1,3-Dimethylbutyl)-N'-phenyl-p-phenylenediamine 268.1979 269.2062 121
P50181 Avermectin B1b monosaccharide 714.4022 715.4140 121

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G100200 hypothetical protein NA 577
Glyma.09G268900 hypothetical protein NA 575
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 572
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 566
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 565
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 565
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 563
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) 561
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 561
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 560