Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55199 Neoechinulin 391.1908 392.1990 —
P55200 Oxybuprocaine 308.2048 617.4153 —
P55202 Triptregeline B 653.2490 654.2596 —
P55204 Monascorubramine 381.1973 382.2060 —
P55205 PA(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)) 666.4297 667.4397 —
P55208 Menaquinol 310.1940 311.2013 —
P55211 391.3353 392.3429 —
P55212 (5Z,9Z)-2-methoxy-5,9-hexacosadienoic acid 422.3731 423.3810 —
P55213 Indocarbazostatin D 512.1345 513.1415 —
P55216 160.9605 161.9681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 605
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 600
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 596
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 595
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family 704, subfamily A, polypeptide 1 588
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 587
Glyma.03G147400 hypothetical protein NA 583
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 579
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 577
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 577