Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11356 6-O-Acetylscutehenanine A 495.2297 496.2346 118
P14899 Mopidralazine 273.1588 274.1671 118
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 503.1184 118
P15867 Symlandine 381.2110 382.2174 118
P15915 Methionine sulfone 181.0438 182.0519 118
P17609 N,N-Didesmethyltramadol 235.1563 236.1631 118
P20973 SB 243213 428.1449 429.1530 118
P28706 Stemphyloxin I 382.2320 383.2393 118
P29385 Acarbose 645.2529 646.2627 118
P29481 TRIPARANOL 437.2060 438.2140 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 605
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 600
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 596
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 595
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family 704, subfamily A, polypeptide 1 588
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 587
Glyma.03G147400 hypothetical protein NA 583
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 579
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 577
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 577