Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32890 2-Hydroxy-3-[(2-carboxyethyl)thio]-3-[2-(8-phenyloctyl)phenyl]propanoic acid 458.2131 459.2212 166
P35009 15-Veratroylgermine 673.3400 674.3443 166
P36333 Paniculidine B 233.1418 234.1491 166
P36634 beta-Casomorphin-7 692.3563 693.3642 166
P43004 889.4915 890.4974 166
P45760 Buxmicrophylline H 598.3926 599.4015 166
P52097 3',5-Dihydroxy-3,4,4'-trimethoxybibenzyl-5-O-glucoside 466.1835 467.1909 166
P00872 Styelsamine B 319.1298 320.1358 165
P01816 9H-Purine-9-ol 136.0401 137.0478 165
P03713 Chlordiazepoxide 299.0822 300.0898 165

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 606
Glyma.07G013500 hypothetical protein NA 606
Glyma.09G274700 hypothetical protein NA 606
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 606
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 606
Glyma.09G275300 hypothetical protein NA 606
Glyma.09G275800 hypothetical protein NA 606
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 606
Glyma.09G276000 hypothetical protein NA 606
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 606