Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54387 | 2,4-Pyrimidinediamine, 5-(5-(1-piperazinylmethyl)-1,3,4-oxadiazol-2-yl)-N4-propyl-N2-(2-(4-pyridinyl)ethyl)- | 423.2512 | 424.2592 | — |
| P54394 | 275.9114 | 276.9192 | — | |
| P54395 | Cladiellisin | 320.2321 | 321.2388 | — |
| P54398 | 394.3338 | 395.3377 | — | |
| P54400 | 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one | 390.2566 | 391.2648 | — |
| P54404 | Phenyl phosphonothioate | 173.9912 | 174.9994 | — |
| P54405 | 4'-Deoxykanokoside C | 622.2536 | 623.2596 | — |
| P54406 | 526.8642 | 527.8738 | — | |
| P54408 | Dracunculifoside M | 580.2829 | 581.2873 | — |
| P54409 | 233.8899 | 234.8982 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 3,529 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 3,445 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 3,412 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 3,377 | |
| Glyma.15G124000 | hypothetical protein | NA | 3,316 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 3,206 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 3,205 | |
| Glyma.16G209300 | hypothetical protein | NA | 3,164 | |
| Glyma.15G121100 | hypothetical protein | NA | 3,117 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 3,117 |