Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54337 Cadiamine 282.1953 283.2028 —
P54341 Pluramycin A 772.3531 773.3602 —
P54342 3-(4-(2-Dimethylamino-1-methylethoxy)phenyl)-1H-pyrazolo(3,4-b)pyridine-1-acetic acid 354.1738 355.1809 —
P54345 Linoleylanilide 355.2937 356.3000 —
P54347 6-octenal 126.1041 127.1111 —
P54349 2-Hydroxypent-3-enenitrile 97.0538 98.0612 —
P54350 Fomlactone A 526.3655 527.3736 —
P54351 3beta,11alpha-Diacetoxy-12-ursene 526.4095 527.4128 —
P54354 623.2567 624.2633 —
P54363 (+)-Acutifolin A 326.1510 327.1617 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 3,529
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 3,445
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 3,412
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3,377
Glyma.15G124000 hypothetical protein NA 3,316
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 3,206
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 3,205
Glyma.16G209300 hypothetical protein NA 3,164
Glyma.15G121100 hypothetical protein NA 3,117
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 3,117