Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54104 | 3-Deoxyestrone | 254.1632 | 255.1704 | — |
| P54106 | 432.7419 | 433.7480 | — | |
| P54111 | 9R-hydroxy-2E,4E-decadienoic acid | 184.1093 | 185.1159 | — |
| P54112 | 352.8207 | 353.8284 | — | |
| P54114 | 180.9669 | 181.9745 | — | |
| P54116 | 356.8340 | 357.8414 | — | |
| P54117 | Chlovalicin | 332.1393 | 333.1472 | — |
| P54119 | Litsenolide C1 | 310.2467 | 311.2532 | — |
| P54121 | 6-O-Glc-paromamine | 485.2244 | 486.2324 | — |
| P54125 | Agrimol F | 640.2606 | 641.2687 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 3,529 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 3,445 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 3,412 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 3,377 | |
| Glyma.15G124000 | hypothetical protein | NA | 3,316 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 3,206 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 3,205 | |
| Glyma.16G209300 | hypothetical protein | NA | 3,164 | |
| Glyma.15G121100 | hypothetical protein | NA | 3,117 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 3,117 |