Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P21913 Eremosulphoxinolide A 464.1861 465.1930 100
P21951 3-O-Isobutyrylkinamycin C 566.1508 567.1587 100
P22523 Taxifolin 3-galactosyl-(1->6)-glucoside 628.1763 629.1823 100
P23684 823.2915 824.2927 100
P23825 Mitrasulgynine 476.1644 477.1746 100
P23903 502.0150 503.0232 100
P25757 1-(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-glycero-3-phosphoserine 569.2739 570.2799 100
P27974 Dubioside A 1102.5320 1103.5298 100
P28862 Perrottetin F 442.1789 443.1878 100
P29847 Met-enkephalin-Arg-Phe 876.3955 877.4006 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 3,529
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 3,445
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 3,412
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3,377
Glyma.15G124000 hypothetical protein NA 3,316
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 3,206
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 3,205
Glyma.16G209300 hypothetical protein NA 3,164
Glyma.15G121100 hypothetical protein NA 3,117
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 3,117