Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40427 Anzuroside 640.3421 641.3485 112
P41440 Thuja-2,4[10]-diene 134.1087 135.1156 112
P43015 Robustaflavone 7''-methyl ether 552.1039 553.1093 112
P46641 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 830.4901 831.4964 112
P47211 [4-((1Z)-2-(Acetylamino)-3-{[1-(1,1'-biphenyl-4-ylmethyl)-2-oxoazepan-3-YL]amino}-3-oxoprop-1-enyl)-2-formylphenyl]acetic acid 567.2412 568.2503 112
P48131 Herbarumin II 244.1302 245.1383 112
P49348 Tirandamycin C 387.2085 388.2183 112
P50908 670.3678 671.3788 112
P50943 Chilocorine A 390.2704 391.2767 112
P04365 Monascorubramine 381.1953 382.2017 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 3,529
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 3,445
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 3,412
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3,377
Glyma.15G124000 hypothetical protein NA 3,316
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 3,206
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 3,205
Glyma.16G209300 hypothetical protein NA 3,164
Glyma.15G121100 hypothetical protein NA 3,117
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 3,117