Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P25734 | Potassium glycerophosphate | 200.0452 | 201.0523 | 120 |
| P25974 | 788.2214 | 789.2244 | 120 | |
| P26912 | 6,8-nonadienal | 138.1036 | 139.1103 | 120 |
| P29898 | SCH 42282 | 780.4610 | 781.4670 | 120 |
| P31333 | 222.1933 | 223.1996 | 120 | |
| P34206 | 958.3426 | 959.3560 | 120 | |
| P40857 | 5beta,6beta:22R,26-diepoxyergosta-4beta,19,27-trihydroxy-24-ene-1,26-dione 3beta-sulphate | 584.2307 | 585.2391 | 120 |
| P42445 | 4-Amino-3-hydroxybutanoylcarnitine | 262.1545 | 263.1625 | 120 |
| P42713 | 5-(3',4',5'-Trihydroxyphenyl)-gamma-valerolactone | 224.0681 | 225.0741 | 120 |
| P42727 | Methyl syramuraldehydate | 242.0783 | 243.0848 | 120 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 3,529 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 3,445 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 3,412 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 3,377 | |
| Glyma.15G124000 | hypothetical protein | NA | 3,316 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 3,206 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 3,205 | |
| Glyma.16G209300 | hypothetical protein | NA | 3,164 | |
| Glyma.15G121100 | hypothetical protein | NA | 3,117 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 3,117 |