Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32263 4-Hydroxydemethylmedicarpin 272.0676 273.0760 147
P33257 2,5-Diisopropyl-3-methylphenol 192.1493 193.1574 147
P36560 10-Hydroxy-cadin-4-en-3-one 236.1744 473.3583 147
P43847 Didemniserinolipid B 663.4039 664.4119 147
P44113 645.4166 646.4222 147
P45062 Valylproline 214.1328 215.1400 147
P46904 455.6709 456.6799 147
P47349 797.9366 798.9377 147
P47397 Prolyl-Arginine 271.1624 272.1709 147
P51669 353.1550 354.1626 147

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 641
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 639
Glyma.06G019800 hypothetical protein NA 637
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 633
Glyma.19G029800 hypothetical protein NA 625
Glyma.15G009800 hypothetical protein NA 621
Glyma.06G201700 hypothetical protein NA 615
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 615
Glyma.08G338900 hypothetical protein NA 609
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 608