Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55235		607.8970	608.9062	—
P55236	Norhygrine	127.0985	128.1063	—
P55237	Briaexcavatolide K	584.2479	585.2553	—
P55238		607.9278	608.9337	—
P55239		609.5829	610.5918	—
P55243		607.9804	608.9906	—
P55244	Beilschmieflavonoid A	614.2514	615.2599	—
P55246	Dicerandrol A	666.1878	667.1909	—
P55247		609.5259	610.5340	—
P55248	Ilmofosine	525.3701	526.3741	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.03G018600	hypothetical protein	AT2G45695:AT2G45695:Ubiquitin related modifier 1	641
Glyma.01G121400	hypothetical protein	AT5G01400:ESP4:HEAT repeat-containing protein	639
Glyma.06G019800	hypothetical protein	NA	637
Glyma.14G201800	hypothetical protein	AT5G58390:AT5G58390:Peroxidase superfamily protein	633
Glyma.19G029800	hypothetical protein	NA	625
Glyma.15G009800	hypothetical protein	NA	621
Glyma.06G201700	hypothetical protein	NA	615
Glyma.16G111400	hypothetical protein	AT4G35510:AT4G35510:PHD finger-like protein	615
Glyma.08G338900	hypothetical protein	NA	609
Glyma.16G196400	hypothetical protein	AT5G07270:XBAT33:uncharacterized protein	608