Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24109 3beta-Sulfooxy-7beta-N-acetylglucosaminylchol-5-en-24-oyltaurine 782.2913 783.3012 124
P24278 Aknadicine 345.1608 346.1691 124
P25509 Petunoside 786.2037 787.2111 124
P28666 11-Hydroxyaclacinomycin X 840.3304 841.3421 124
P29891 Ustilipid C 634.3999 635.4102 124
P30850 387.7083 388.7173 124
P32406 Amritoside B 588.2412 589.2511 124
P33884 Stephalonine G 541.2389 542.2484 124
P36856 920.2028 921.2079 124
P37516 Hoffmanniolide 878.4295 879.4342 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 641
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 639
Glyma.06G019800 hypothetical protein NA 637
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 633
Glyma.19G029800 hypothetical protein NA 625
Glyma.15G009800 hypothetical protein NA 621
Glyma.06G201700 hypothetical protein NA 615
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 615
Glyma.08G338900 hypothetical protein NA 609
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 608