Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P34730	MANNICH BASES	780.2858	781.2907	137
P40695	Bacopasaponin A	736.4305	737.4425	137
P42674	Anzuroside	640.3459	641.3511	137
P43702		1069.0524	1070.0592	137
P47544	Ancorinoside C	861.4698	862.4684	137
P08475	Syringin	372.1434	373.1471	136
P08524		813.2247	814.2377	136
P09463	Cudratricusxanthone H	394.1400	395.1477	136
P10397	Navitoclax	973.3105	974.3101	136
P15231	2-Propylphenol	136.0871	137.0946	136

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.08G330400	hypothetical protein	NA	652
Glyma.08G330500	hypothetical protein	AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein	652
Glyma.10G265400	hypothetical protein	AT2G01290:RPI2:	648
Glyma.06G085100	hypothetical protein	NA	647
Glyma.15G141100	hypothetical protein	NA	647
Glyma.06G084800	hypothetical protein	NA	646
Glyma.06G085000	hypothetical protein	NA	646
Glyma.02G205400	hypothetical protein	AT5G57880:MPS1:multipolar spindle 1	645
Glyma.19G006900	hypothetical protein	AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein	645
Glyma.04G104400	hypothetical protein	NA	643