Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P21750 Vismiaguianone E 428.1608 429.1691 106
P24821 ethyl 11Z-hexadecenoate 282.2559 283.2629 106
P28118 1022.3240 1023.3369 106
P28609 Methylsulfonyl 4-[(2-carbamimidoyl-3,4-dihydro-1H-isoquinolin-7-yl)oxymethyl]-1-pyridin-4-ylpiperidine-4-carboxylate 487.1867 488.1962 106
P29662 2,3-Dihydro-9-hydroxy-2-[1-(6-feruloyl)-beta-D-glucosyloxy-1-methylethyl]-7H-furo[3,2-g][1]benzopyran-7-one 600.1811 601.1892 106
P31521 Conodiparine F 736.3832 737.3898 106
P31941 9-chloro-10-hydroxy-octadecanoic acid 334.2284 335.2363 106
P32356 PA(a-15:0/5-iso PGF2VI) 704.4251 705.4351 106
P32718 A 75943 281.1621 282.1689 106
P35068 508.3543 509.3632 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G330400 hypothetical protein NA 652
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 652
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 648
Glyma.06G085100 hypothetical protein NA 647
Glyma.15G141100 hypothetical protein NA 647
Glyma.06G084800 hypothetical protein NA 646
Glyma.06G085000 hypothetical protein NA 646
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 645
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 645
Glyma.04G104400 hypothetical protein NA 643