Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 688
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 678
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 677
Glyma.18G112600 hypothetical protein NA 676
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 671
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 670
Glyma.01G045600 hypothetical protein NA 669
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 666
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 665
Glyma.20G013100 hypothetical protein NA 654