Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P03225 Chlorambucil-tertiary butyl ester 359.1400 360.1461 210
P05139 310.6259 311.6315 210
P27684 309.2743 310.2795 210
P04549 Cyclosulfamuron 421.1071 422.1091 209
P13108 Bms-707035 410.1081 411.1142 209
P14970 Benzonaphthazepine 243.1062 244.1135 209
P44253 285.6155 286.6223 209
P50982 Oleamide 281.2671 282.2752 209
P16775 PA(10:0/13:0) 522.3343 523.3435 208
P20730 1-dodecanoyl-glycero-3-phospho-(1'-myo-inositol) 516.2330 517.2397 208

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 688
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 678
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 677
Glyma.18G112600 hypothetical protein NA 676
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 671
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 670
Glyma.01G045600 hypothetical protein NA 669
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 666
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 665
Glyma.20G013100 hypothetical protein NA 654