Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08554 Jasminoside A 330.1644 331.1724 127
P10082 Trifuhalol B 390.0587 391.0660 127
P10739 Antibiotic D 788-7 515.1878 516.1962 127
P10870 Isorhamnetin 3-sophoroside-7-glucoside 802.2147 803.2205 127
P12319 Didemethylcitalopram 296.1334 297.1412 127
P13946 Ethyl (E)-3-diethoxyphosphinothioyloxybut-2-enoate 282.0724 283.0815 127
P14285 Triethylene glycol dimethacrylate 286.1392 287.1451 127
P19144 4-Fluoro-1-[2-[(4-methyl-1-methylsulfonylpiperidin-4-yl)amino]acetyl]pyrrolidine-2-carbonitrile 346.1459 347.1558 127
P20602 Isorhamnetin 3-gentiotrioside-7-glucoside 964.2883 965.2932 127
P21706 dTDP-4-hydroxyamino-4,6-dideoxy-alpha-D-glucose 563.1008 564.1089 127

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 688
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 678
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 677
Glyma.18G112600 hypothetical protein NA 676
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 671
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 670
Glyma.01G045600 hypothetical protein NA 669
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 666
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 665
Glyma.20G013100 hypothetical protein NA 654