Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P35704 Phenol, 2-(2H-benzotriazol-2-yl)-4,6-bis(1,1-dimethylpropyl)- 351.2332 352.2403 144
P55192 2-Hydroxy-24-keto-octacosanolide 452.3854 453.3951 144
P00964 Glutarimide 113.0469 227.1009 143
P11762 (S)-ATPA 228.1093 229.1177 143
P16245 173.1267 174.1346 143
P18452 409.1206 410.1280 143
P26523 3-(3,5-dihydroxyphenyl)-4-(2-{3-[6-hydroxy-3-(3-hydroxyphenyl)-2-phenyl-2,3-dihydro-1-benzofuran-4-yl]-2-phenyl-2,3-dihydro-1-benzofuran-5-yl}ethenyl)-2-(4-hydroxyphenyl)-2,3-dihydro-1-benzofuran-5,6-diol 874.2788 875.2828 143
P28153 Dehydroprotostemonine 415.2032 416.2104 143
P42603 463.1322 464.1409 143
P48055 1-hexadecyl-2-(9Z-nonadecenoyl)-glycero-3-phospho-(1'-sn-glycerol) 748.5600 749.5665 143

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G210300 hypothetical protein NA 707
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 706
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 705
Glyma.14G213400 hypothetical protein NA 705
Glyma.09G253900 hypothetical protein NA 700
Glyma.09G253800 hypothetical protein NA 699
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 692
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 692
Glyma.20G120200 hypothetical protein NA 692
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 691