Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55235		607.8970	608.9062	—
P55236	Norhygrine	127.0985	128.1063	—
P55237	Briaexcavatolide K	584.2479	585.2553	—
P55238		607.9278	608.9337	—
P55239		609.5829	610.5918	—
P55243		607.9804	608.9906	—
P55244	Beilschmieflavonoid A	614.2514	615.2599	—
P55246	Dicerandrol A	666.1878	667.1909	—
P55247		609.5259	610.5340	—
P55248	Ilmofosine	525.3701	526.3741	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.08G210300	hypothetical protein	NA	707
Glyma.10G238200	hypothetical protein	AT5G07250:RBL3:RHOMBOID-like protein 3	706
Glyma.12G186200	hypothetical protein	AT3G44350:NAC061:NAC domain containing protein 61	705
Glyma.14G213400	hypothetical protein	NA	705
Glyma.09G253900	hypothetical protein	NA	700
Glyma.09G253800	hypothetical protein	NA	699
Glyma.04G190200	hypothetical protein	AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1	692
Glyma.09G186700	hypothetical protein	AT1G20050:HYD1:C-8,7 sterol isomerase	692
Glyma.20G120200	hypothetical protein	NA	692
Glyma.03G019600	hypothetical protein	AT2G45640:SAP18:SIN3 associated polypeptide P18	691