Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54757 stigmast-5-en-3beta-yl (3E-pentenoate) 496.4182 497.4269 —
P54758 Ser-Leu-Ile-Gly-Lys-Val 615.4030 616.4081 —
P54762 Crambescin A 448.3499 449.3575 —
P54764 Sodwanone B 484.3229 485.3327 —
P54765 Limonenecarboxylic acid 180.1139 181.1211 —
P54766 Benzanthrin A 634.2907 635.2923 —
P54767 Viburtinal 160.0510 161.0590 —
P54768 Ajugapantin A 550.2417 551.2507 —
P54775 113.9490 114.9570 —
P54777 Sideretin 224.0327 225.0403 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G210300 hypothetical protein NA 707
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 706
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 705
Glyma.14G213400 hypothetical protein NA 705
Glyma.09G253900 hypothetical protein NA 700
Glyma.09G253800 hypothetical protein NA 699
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 692
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 692
Glyma.20G120200 hypothetical protein NA 692
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 691