Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08409 Hydroxydesmthyl doxepin glucuronide 471.1930 472.1991 113
P09805 ES 242-1 604.2235 605.2299 113
P11463 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1959 371.2038 113
P12004 N-(1-Deoxy-1-fructosyl)tyrosine 343.1239 344.1305 113
P12768 883.3117 884.3193 113
P18966 Notoamide H 479.2104 480.2136 113
P19107 862.2377 863.2433 113
P20003 14,15-Dihydroxygelsenicine 358.1544 359.1638 113
P20634 Euphoscopin F 538.2526 539.2633 113
P22004 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1055 187.1138 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G210300 hypothetical protein NA 707
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 706
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 705
Glyma.14G213400 hypothetical protein NA 705
Glyma.09G253900 hypothetical protein NA 700
Glyma.09G253800 hypothetical protein NA 699
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 692
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 692
Glyma.20G120200 hypothetical protein NA 692
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 691