Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06763 N-Desmethylzolmitriptan 273.1467 274.1551 114
P07091 799.2130 800.2186 114
P09042 Siphonol E 736.2692 737.2706 114
P10054 MG(6 keto-PGF1alpha/0:0/0:0) 444.2703 445.2782 114
P11712 888.3953 889.4014 114
P15701 601.2381 602.2437 114
P17556 Ganomastenol C 254.1844 255.1927 114
P18837 Ipanguline B2 435.1855 436.1924 114
P21559 Paulomycin B 772.2261 773.2335 114
P22110 Syringic acid glucuronide 374.0846 375.0907 114

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G210300 hypothetical protein NA 707
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 706
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 705
Glyma.14G213400 hypothetical protein NA 705
Glyma.09G253900 hypothetical protein NA 700
Glyma.09G253800 hypothetical protein NA 699
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 692
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 692
Glyma.20G120200 hypothetical protein NA 692
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 691