Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06071 Proteacin 473.1514 474.1552 216
P23606 981.3248 982.3265 216
P25233 Ligujapone 202.1001 203.1075 216
P34921 Xyloccensin O 700.2387 701.2457 216
P52079 (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine 204.1493 205.1577 216
P08763 831.2168 832.2238 215
P36727 Cyclopentenyl propionate musk 264.2057 265.2136 215
P40346 570.1408 571.1471 215
P48063 203.5863 204.5948 215
P52212 2-Chloro-N-icosa-5,8,11,14-tetraenylacetamide 365.2460 366.2546 215

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G210300 hypothetical protein NA 707
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 706
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 705
Glyma.14G213400 hypothetical protein NA 705
Glyma.09G253900 hypothetical protein NA 700
Glyma.09G253800 hypothetical protein NA 699
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 692
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 692
Glyma.20G120200 hypothetical protein NA 692
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 691