Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11240 6-Benzylaminopurine 225.1038 226.1090 123
P15609 2-Isopropylfuran 110.0718 111.0795 123
P15845 Nigrospoxydon C 294.0747 295.0816 123
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 315.1765 123
P17713 939.2673 940.2706 123
P20071 Melochinone 331.1571 332.1663 123
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 538.3528 123
P30440 2-Isopropylfuran 110.0717 111.0792 123
P32052 Zanamivir 332.1327 333.1402 123
P33021 7-O-Methyl-N-deacetylipecoside 535.2335 536.2382 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G210300 hypothetical protein NA 707
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 706
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 705
Glyma.14G213400 hypothetical protein NA 705
Glyma.09G253900 hypothetical protein NA 700
Glyma.09G253800 hypothetical protein NA 699
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 692
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 692
Glyma.20G120200 hypothetical protein NA 692
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 691