Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26418 Antibiotic 273a1alpha 1112.3282 1113.3409 231
P30811 767.2566 768.2643 231
P04078 311.5769 312.5829 230
P14825 9R-hydroxy-2E,4E-decadienoic acid 184.1086 185.1164 230
P17592 175.1437 176.1505 230
P31714 4,4'-Dihydroxystilbene 212.0832 213.0898 230
P20017 343.2428 344.2506 229
P21903 Triptregeline H 611.2282 612.2377 229
P31991 Irroratin A 378.2030 379.2088 229
P26216 trans-2-Enoyl-OPC6-CoA 1013.2870 1014.2977 228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G032400 hypothetical protein AT1G21640:NADK2:NAD kinase 2 10
Glyma.13G067500 hypothetical protein NA 10
Glyma.13G080300 hypothetical protein AT1G77600:AT1G77600:ARM repeat superfamily protein 10
Glyma.13G154100 hypothetical protein NA 10
Glyma.13G168000 hypothetical protein NA 10
Glyma.13G293600 hypothetical protein NA 10
Glyma.14G035300 hypothetical protein AT5G01430:AT5G01430:Got1/Sft2-like vescicle transport protein family 10
Glyma.14G035400 hypothetical protein AT5G12150:AT5G12150:Rho GTPase activation protein (RhoGAP) with PH domain-containing protein__AT5G19390:AT5G19390:Rho GTPase activation protein (RhoGAP) with PH domain-containing protein 10
Glyma.14G095700 hypothetical protein AT2G26140:ftsh4:FTSH protease 4 10
Glyma.14G201900 hypothetical protein AT1G32210:ATDAD1:Defender against death (DAD family) protein__AT2G35520:DAD2:Defender against death (DAD family) protein 10