Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08589 Benzomalvin D 381.1494 382.1579 250
P23519 Lapathoside A 986.2755 987.2789 250
P44926 Eunicellin 522.2769 523.2852 250
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 467.2613 249
P35069 1-hexadecanoyl-2-succinyl-sn-glycero-phosphocholine 595.3591 596.3657 249
P11244 Maculalactone K 532.1815 533.1890 248
P18979 Justalakonin 528.1312 529.1358 247
P49160 924.4051 925.4092 247
P30313 Sufotidine 421.2175 422.2210 246
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 455.3485 246

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G032400 hypothetical protein AT1G21640:NADK2:NAD kinase 2 10
Glyma.13G067500 hypothetical protein NA 10
Glyma.13G080300 hypothetical protein AT1G77600:AT1G77600:ARM repeat superfamily protein 10
Glyma.13G154100 hypothetical protein NA 10
Glyma.13G168000 hypothetical protein NA 10
Glyma.13G293600 hypothetical protein NA 10
Glyma.14G035300 hypothetical protein AT5G01430:AT5G01430:Got1/Sft2-like vescicle transport protein family 10
Glyma.14G035400 hypothetical protein AT5G12150:AT5G12150:Rho GTPase activation protein (RhoGAP) with PH domain-containing protein__AT5G19390:AT5G19390:Rho GTPase activation protein (RhoGAP) with PH domain-containing protein 10
Glyma.14G095700 hypothetical protein AT2G26140:ftsh4:FTSH protease 4 10
Glyma.14G201900 hypothetical protein AT1G32210:ATDAD1:Defender against death (DAD family) protein__AT2G35520:DAD2:Defender against death (DAD family) protein 10