Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55600 4-O-Demethylpenclomedine 308.8697 309.8759 —
P55602 24-homo-3alpha,7alpha,16alpha-trihydroxy-5beta-cholan-25-oic acid 422.3005 423.3085 —
P55603 Faleoconitine 689.3183 690.3285 —
P55604 128.9612 129.9688 —
P55605 113.9706 114.9777 —
P55606 134.9623 135.9696 —
P55607 Citranaxanthin 456.3418 457.3495 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G033600 hypothetical protein NA 11
Glyma.20G034600 hypothetical protein AT1G08750:AT1G08750:Peptidase C13 family 11
Glyma.20G094500 hypothetical protein NA 11
Glyma.20G139100 hypothetical protein NA 11
Glyma.02G212500 hypothetical protein AT2G33735:AT2G33735:Chaperone DnaJ-domain superfamily protein 10
Glyma.02G289000 hypothetical protein AT5G54800:GPT1:glucose 6-phosphate/phosphate translocator 1 10
Glyma.02G290200 hypothetical protein AT3G06530:AT3G06530:ARM repeat superfamily protein 10
Glyma.03G033800 EXPB3 AT1G65680:EXPB2:expansin B2 10
Glyma.03G128000 hypothetical protein NA 10
Glyma.03G145600 hypothetical protein NA 10