Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P43147 Avermectin A2b monosaccharide 746.4252 747.4310 179
P43543 26-O-beta-D-glucopyranosyl-(25R)-furost-5,16(17),20(22)-trien-3beta,26-diol-3-O-alpha-l-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside 882.4555 883.4653 179
P43704 3'''-O-Methylfukugetin 570.1129 571.1194 179
P53747 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2443 363.2517 179
P02880 183.5443 184.5519 178
P07726 Tolmetin glucuronide 433.1375 434.1439 178
P08737 3-Isopentadienyl-3',4,5'-trihydroxystilbene 294.1273 295.1337 178
P14990 Enkephalin L 555.2689 556.2764 178
P15582 853.3764 854.3854 178
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 284.1837 178

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G201700 hypothetical protein NA 738
Glyma.05G164700 hypothetical protein NA 731
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 730
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 729
Glyma.17G218600 hypothetical protein NA 719
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 718
Glyma.17G218700 hypothetical protein NA 716
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cyclic nucleotide phosphodiesterase family protein 714
Glyma.09G270400 hypothetical protein NA 710
Glyma.08G210200 hypothetical protein NA 707