Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P48302 Ciprofloxacin 331.1327 332.1422 114
P48655 Hypodematine 247.0963 248.1039 114
P50054 930.4138 931.4203 114
P51460 Veliparib 244.1327 245.1399 114
P54448 Furaptra 434.0660 435.0744 114
P55413 Foetisulfide A 224.0374 225.0446 114
P01836 2-Hydroxynicotinic acid 139.0257 140.0331 113
P05182 5a,11a-Dehydrooxytetracycline 458.1309 459.1380 113
P06695 Glycoperine 391.1328 392.1408 113
P07648 307.0178 308.0261 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G201700 hypothetical protein NA 738
Glyma.05G164700 hypothetical protein NA 731
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 730
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 729
Glyma.17G218600 hypothetical protein NA 719
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 718
Glyma.17G218700 hypothetical protein NA 716
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cyclic nucleotide phosphodiesterase family protein 714
Glyma.09G270400 hypothetical protein NA 710
Glyma.08G210200 hypothetical protein NA 707