Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37898 Dechlorobarbamide 426.0942 427.1011 118
P42831 N-(33-(9Z,12Z-octadecadienoyloxy)-tritriacontanoyl)-heneicosasphinganine 1098.0490 1099.0581 118
P44498 PA(18:4(6Z,9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)-OH(19S)) 732.4399 733.4477 118
P46179 Kitamycin A 464.2157 465.2219 118
P46842 Aypgkf 681.3415 682.3472 118
P53532 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0636 238.0716 118
P02113 1H-1,4-Diazepine, hexahydro-1-((5-iodo-1-naphthalenyl)sulfonyl)- 416.0121 417.0190 117
P04168 2-Nitrophenyl acetate 181.0357 182.0441 117
P05831 2-Methacryloyloxyethyl phosphorylcholine 295.1190 296.1230 117
P08297 Asparenomycin A 340.0759 341.0847 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G201700 hypothetical protein NA 738
Glyma.05G164700 hypothetical protein NA 731
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 730
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 729
Glyma.17G218600 hypothetical protein NA 719
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 718
Glyma.17G218700 hypothetical protein NA 716
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cyclic nucleotide phosphodiesterase family protein 714
Glyma.09G270400 hypothetical protein NA 710
Glyma.08G210200 hypothetical protein NA 707